Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL
2C2H Chain:B ((1-177))
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYI----DNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL--------------
General information:
TITO was launched using:
RESULT:
Template:
2C2H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140016 for 1392 contacts (-100.6/contact) +
2D Compatibility (PS) -18576 + (NN) -7950 + (LL) 924
1D Compatibility (HY) -24000 + (ID) 6200
Total energy: -195818.0 ( -140.67 by residue)
QMean score : 0.723
(partial model without unconserved sides chains):
PDB file :
Tito_2C2H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C2H-query.scw
PDB file :
Tito_Scwrl_2C2H.pdb
: