Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GSHMLEMRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
1W55 Chain:A ((209-367))
-----EIFTGNGFDVHEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMKFKNANSMELLKQAYDKVREIGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRINVKATTTEKLGFIGRKEGMAVLSSVNLKYFD-
General information:
TITO was launched using:
RESULT:
Template:
1W55.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114697 for 1306 contacts (-87.8/contact) +
2D Compatibility (PS) -17929 + (NN) -12150 + (LL) 292
1D Compatibility (HY) -11600 + (ID) 3950
Total energy: -160034.0 ( -122.54 by residue)
QMean score : 0.714
(partial model without unconserved sides chains):
PDB file :
Tito_1W55.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W55-query.scw
PDB file :
Tito_Scwrl_1W55.pdb
: