Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRQQFYHSVQDLSGGSRQHEAPSNRPLNELLTPQGPSPRTQHCDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSNLIQLTGQSFSTDAAGSRGGSDGTPRGSPSPASVSSGRKSPHSKSPAEQRERKSLADDKKKVKNLGYRDSGYYWEVPPSEVQLLKRIGTGSFGTVFRGRWHG---DVAVKVLKVSQPTAEQAQAFKNEMQVLRKTRHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVADTRFDMVQ-LIDVARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMT-GSLPYSHIGCRDQIIFMVGRGYLSPDLSKISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPACLLSAARLVP |
| 4CSV Chain:A ((6-267)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WEIPRSEITLERKLGSGQFGEVYEGKWRNYNIEVAVKTLKEGTMSVEE---FLQEAQIMKKLKHPNLVQLYGVCTKEPPIYIITEYMSHGSLLDYLRDC----VNAQALLDMAAQVASGMAYLESQNFIHRDLAARNCLVGENNVVKVADFG---------------FP---IKWTAPEAISY---NRFSIKSDVWAFGILLWEIFTYGQVPYPGMSG-SEVIEQVERGYRMPR----PQGCPEEIYELMLQCWNKSPEERPTFAETLHALETMFL---------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4CSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -170187 for 1827 contacts (-93.2/contact) +
2D Compatibility (PS) -24839 + (NN) -9496 + (LL) 17772
1D Compatibility (HY) -22000 + (ID) 4650
Total energy: -213400.0 ( -116.80 by residue)
QMean score : 0.416
|
|
|