Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLIPIVIEQTSRGERAYDIYSRLVKERIIFVTGPVEDNMASVIVAQLLFLESENPDKDIYMYINSPGGVVTAGLSIYDTMQYIKPDVSTLCIGQAASMGSLLLAAGTEGKRYSLPHSRIMIHQPSGGYQGQATDIEIHANEILRVKRKLNQIYEKHTGNSLKKIEGMMERDKFMDPEEARRIGLIDRVIAERKDIKVENIKVEQKVG
1TG6 Chain:E ((57-245))
-PLIPIVV---------YDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPPQDGEDEPTLVQK--
General information:
TITO was launched using:
RESULT:
Template:
1TG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115688 for 1376 contacts (-84.1/contact) +
2D Compatibility (PS) -19405 + (NN) -7681 + (LL) 980
1D Compatibility (HY) -24400 + (ID) 5900
Total energy: -172094.0 ( -125.07 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_1TG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TG6-query.scw
PDB file :
Tito_Scwrl_1TG6.pdb
: