Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNDLKEVLLTEEDIQNICKELGAQLTKDYQGK-------PLVCVGILKGSAMFMSDLIKRI---DTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVYSN
1P19 Chain:A ((9-190))
-----EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSY--GLTSSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVY--
General information:
TITO was launched using:
RESULT:
Template:
1P19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121472 for 1299 contacts (-93.5/contact) +
2D Compatibility (PS) -18126 + (NN) -1816 + (LL) 36
1D Compatibility (HY) -20800 + (ID) 3750
Total energy: -165928.0 ( -127.74 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_1P19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P19-query.scw
PDB file :
Tito_Scwrl_1P19.pdb
: