Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTTPYDIIGKE-ALYDMIDYFYTLVEKDERLNHLFPGDFAETSRKQKQFLTQFLGGPNIYTEEHGHPMLRKRHMDFTITEFERDAWLENMQTAINRAAFPQGVGDYLFERLRLTANHMVNS
1UX8 Chain:A ((6-124))
--NAPYEAIG-EELLSQLVDTFYERVASHPLLKPIFPSDLTETARKQKQFLTQYLGGPPLYTEEHGHPMLRARHLPFPITNERADAWLSCMKDAMDHVGLEGEIREFLFGRLELTARHMVNQ
General information:
TITO was launched using:
RESULT:
Template:
1UX8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36975 for 933 contacts (-39.6/contact) +
2D Compatibility (PS) -12693 + (NN) -7352 + (LL) 324
1D Compatibility (HY) -12400 + (ID) 3100
Total energy: -72196.0 ( -77.38 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1UX8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UX8-query.scw
PDB file :
Tito_Scwrl_1UX8.pdb
: