Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAEKITQGTEGLNVPNEPIIPFIIGDGIGPDIWKAASRVIDAAVEKAYNGEKRIEWKEVLAGQKAFDTTGEWLPQETLDTIKEYLIAVKGPLTTPIGG------GIRSLNVALRQELDLFTCLRPVRWFKGVP--SPVK--RPQDVDMVIFRENTEDIYAGIEFKEGTTEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYAIDNNRKSVTLVHKGNIMKFTEGSFKQWGYDLALSEFGDQVFTWQQYDEIVENEGRDAANAAQEKAEKEGKIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYAGLNKVNPSSVILSSVLMLEH-LGWQEAADKITDSIEDTIASKVVTYDFARLMDGAEEVSTSAFADELIKNLK |
| 2Y3Z Chain:A ((3-348)) | -----------------SMKVAVLPGDGIGPEVTEAALKVLRALDEA--EG-LGLAYEVFPFGGAAIDAFGEPFPEPTRKGVEEAEAVLLGSVGGPKWDGLPRKIRPETGLLSLRKSQDLFANLRPAKVFPGLERLSPLKEEIARGVDVLIVRELTGGIYFGEPRG-----------------------MSEAEAWNTERYSKPEVERVARVAFEAARKR-RKHVVSVDKANVLEV-GEFWRKTVEEVG-RGYPD--------------------------------VALEHQYVDAMAMHLVRSPARFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLG--RGTPVFEPVHGSAPDIAGKGIANPTAAILSAAMMLEHAFGLVELARKVEDAVAKALLE-TPPPDLGG------SAGTEAFTATVLRHLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y3Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166987 for 3028 contacts (-55.1/contact) +
2D Compatibility (PS) -36349 + (NN) -10622 + (LL) 6128
1D Compatibility (HY) -14800 + (ID) 5150
Total energy: -227780.0 ( -75.22 by residue)
QMean score : 0.489
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