Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATQDPRTKFKTTEYEKQEQEVPGLQSEMTPAPDCGETSYQGHQRLQGYKMLVTGGDSAIGRAAAIAYAKEGADVAINYLPSEEQDAQEVRQVIEESGQKAVLIPGDIRDEQFNYDLVEQAYQQLGGLDNVTLVAGHQQYHDDIHGFTTEAFTETFETNVYPLFWTVQKALEYLKP--GASITTTSSVQGYNPS-PILHDYAASKAAIISLTKSFSEELGPKGIRVNCVAPGPFWSPLQIS--GGQPQSKIPTFGQKTPLGRAGQPVELCGTYVLLASEESSYTTGQVFGVSGGVQID |
| 3TOX Chain:G ((4-255)) | -------------------------------------------SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVT--ARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANL--APETRGFVEGLHA-LKRIARPEEIAEAALYLASDGASFVTGAALLADGGASV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89632 for 2149 contacts (-41.7/contact) +
2D Compatibility (PS) -26339 + (NN) -10593 + (LL) 1740
1D Compatibility (HY) -8000 + (ID) 4150
Total energy: -136974.0 ( -63.74 by residue)
QMean score : 0.499
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