Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLENKVAVVTGASTGIGQASAIALAQEGAYVL--AVDIAEAVSETVDKIKSNGDNAKAYNVDISDEQQVVDFVSDIKEQFGRIDVLFNNAGV--DNAAGRIHEYPIDVYDKIMNVDMRGTILMTKMMLPLMMNQ-GGSIVNTSSFSGQAEDLYRSGYNAAKGAVINFTKSIAIEYGRDGIRSNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGVMAYTWPGEMLSDDSWKRTLE |
| 4JRO Chain:C ((27-270)) | ---LQGKVAVVTGGSRGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVEAMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKE---DEWDDVININLKGTFLCTKAVSRTMMKQRAGKIINMASVVGLIGNAGQANYVASKAGVIGLTKTTARELAPRGINVNAVAPGFITTDMTDKLD--------EKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYITGQTLSVDGGMV------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96165 for 2051 contacts (-46.9/contact) +
2D Compatibility (PS) -25355 + (NN) -3638 + (LL) 1368
1D Compatibility (HY) -15200 + (ID) 4950
Total energy: -143940.0 ( -70.18 by residue)
QMean score : 0.484
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