Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTFKKGVILDAKSVGL-----KALEVLKEVADFDFYEV--TSPNQIVERSIEAEIMVLN--KVVITQEVLSQLPKLKLICITAT----GTDNVDIKSAKALGIEVKNVSAYSTESVAQHTLACALSLLGRINDYDRYCKSGEYSQSDI----------FTHISDIKMGLIKGGQWGVIGLGNIGKRVAKLAQAFGAKVVYFSPKDKKE-----EYE-RLSLEELLKTSGIISIHAPLNESTRDLIALKELQSLKDGAILINVGRGGIVNEKDLALILET-KDLYYASDVFVKEPFEKDHAFLNPKIQNKLLLTPHIAWAYSDSLKTLVEKTKENIQDFLASQK |
| 3GG9 Chain:A ((2-328)) | ---SLKIAVLDD--YQDAVRKLDCFSLLQD-HEVKVFNNTVKGVGQLAARVADVEALVLIRERTRVTRQLLDRLPKLKIISQTGRVSRDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAW-QQSGLKSTTMPPNFGIG------RVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTL-L--RMENCICTPHIGYVERESYEMYFGIAFQNILDILQGNV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180172 for 2313 contacts (-77.9/contact) +
2D Compatibility (PS) -32663 + (NN) -12142 + (LL) 1172
1D Compatibility (HY) -20000 + (ID) 3950
Total energy: -247755.0 ( -107.11 by residue)
QMean score : 0.563
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