Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQKELVDMGQGIFLVHCSQCHGITADGLHGSAQNLLRWDKEEGIMDTIKHGSKGMDYPAGEMPAIEMDEKDAKAIASYVMAELSSVKKTKNPQLIDKGKELFESMGCAGCHGNDGKGLQENQVFAADLTT----YG---TESFLRNILTHGKKGNIGRMPSFKYKNFSDLQVKALVEFIKSLKPLED |
| 2C8S Chain:A ((28-134)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGGRDTPAVKKFLET-GENL-YIDDKSCLRNGESLFAT-SCSGCHGHLAEGKL-----GPGLNDNYWTYPSNTTDVGLFATIFGG---ANGMMGPHN-ENLTPDEMLQTIAWIRHLYTGPK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11844 for 712 contacts (-16.6/contact) +
2D Compatibility (PS) -10782 + (NN) -7694 + (LL) 12964
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -22406.0 ( -31.47 by residue)
QMean score : 0.480
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