Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNILNLALVGALSASFLMAKPAHNANNSTHNTKETTDASAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKAEKLNQTPEFKAMMEAVKKQALVEFWAKKQAEEVKKIQIPEKEMQDFYNANKDQL------FVKQEAHARHILVKTED----------------------EAKRIISEIDKQPKAKKEAKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKIVINK |
| 1YW5 Chain:A ((37-177)) | -----------------------------------------------------------------------------------------------------------------------------------PPYGTDKEVLNAYIAKFKNNGYKPLVNEDGQVRVSHLLIKNNQSRKPKSWKSPDGISRTRDESIQILKKHLERILSGE-----VKLSELANTESDCS-SHD--RGGDLGFFSKGQMQPPFEEAAFNLHVGEVS-NIIETNSGVHILQRTG---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YW5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32364 for 773 contacts (-41.9/contact) +
2D Compatibility (PS) -12280 + (NN) -6206 + (LL) 15128
1D Compatibility (HY) -2800 + (ID) 1750
Total energy: -40272.0 ( -52.10 by residue)
QMean score : 0.481
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