Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKKCRHLLQTSDLSLDEIKLLLNKAS-VYANDFNAVSLETREKMQDKIIVALFFENSTRTVSSFEIASLRLGAKIVKLN--MQTSSTSKGETLIDTFKNIHAMQPDAIITRHAFSSAPFKLAEFS-QCPLINAGSGTSAHPTQALLDLLTLYRHFGSLENLKGKKIAFIGDVKNSRVANSNIKLLQRL-GLEIMLCAPSSM-LPITPLK---------TTH-NIEEAIGFADILMSLRTQTERHNAPIFASLKDYGNAYCITQKRLETHAKNKEVIILHPGPVHRDIDIESAVLEDKRSKVLEQVKNGVAMRMAVLEFLLLD |
| 2IPO Chain:A ((3-304)) | -PLYQKHIISINDLSRDDLNLVLATAAKLKAN-------PQPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVI-STYVDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNL---HVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYANVK---AQFVLRASDLHNAKANMKV--LHPLP--RVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2IPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -144101 for 2437 contacts (-59.1/contact) +
2D Compatibility (PS) -30826 + (NN) -12422 + (LL) 1156
1D Compatibility (HY) -17200 + (ID) 5400
Total energy: -208793.0 ( -85.68 by residue)
QMean score : 0.396
|
|
|