Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGTND
3RVS Chain:A ((9-127))
LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGG-YGFVISDWDMPNMDGLELLKTIRADGAMSALPVLMVTARAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKLG
General information:
TITO was launched using:
RESULT:
Template:
3RVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69307 for 939 contacts (-73.8/contact) +
2D Compatibility (PS) -13083 + (NN) -7822 + (LL) -76
1D Compatibility (HY) -14400 + (ID) 2850
Total energy: -107538.0 ( -114.52 by residue)
QMean score : 0.725
(partial model without unconserved sides chains):
PDB file :
Tito_3RVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RVS-query.scw
PDB file :
Tito_Scwrl_3RVS.pdb
: