Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSTLKHLAIIM-DGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFS-TENWKRPKSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILRLENDTRYFKDFTQVLALNYGSKNELSRAFKSLLENPPNHINNIESLENE-ISHRLDT-HDLPEVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELKC
1JP3 Chain:A ((13-240))
LPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSMELFVWALDSEVKSLHR---------------HNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHV-CMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRE--------
General information:
TITO was launched using:
RESULT:
Template:
1JP3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87586 for 1590 contacts (-55.1/contact) +
2D Compatibility (PS) -21998 + (NN) -6942 + (LL) 1636
1D Compatibility (HY) -10400 + (ID) 4150
Total energy: -129440.0 ( -81.41 by residue)
QMean score : 0.380
(partial model without unconserved sides chains):
PDB file :
Tito_1JP3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JP3-query.scw
PDB file :
Tito_Scwrl_1JP3.pdb
: