Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METLQTHRVLQALIGHFTPFLESGITELIINTEQELWLYKINNTREKRGHVLFDKAFLLRFCEQL-ASFRGLFFDEEHPTLNCSI---PFTRYRVSANHFSITTNNQITLNIRVPRLKPLSLEDFTFKVSNPESLKNLALKG-HNILISGETSSGKTSLLNA-LLDCVNKDE-RVVSVEDSQELDLKAFSNCVGLLVGKQENTRFNYEDALNMAMRLNPDRLIVGE-IDTRNAALFLRLGNTGHKGMLSTIHANSAQNTLEALSLNLSMRYTHSLDKDLMRAYFKSAIDVIVHVNKI----NNERQIAEVLWTKEL---------------------------------------------------- |
| 2GSZ Chain:A ((1-349)) | --ELKILEIIKEAIEL-------GASDIHLTAGAPPAVRIDGYIKFLKDFPRLTPEDTQKLAYSVMSEKHRQKLEENGQ-VDFSFGVRGVGRFRANV----FYQRGSVAAALRSLPAEIPEFKKLGL----PDKVLELCHRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVGEDTK--SFADALRAALREDPDVIFVGEMRDLETVETALRAAETGH-LVFGTLHTNTAIDTIHRI-----VDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYELLIPNTAIRNLIRENKLQQVYSLMQMQTMNQTLYKLYKQGLITLEDAMEASPDPKELER |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GSZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142644 for 2124 contacts (-67.2/contact) +
2D Compatibility (PS) -30276 + (NN) -14256 + (LL) 1520
1D Compatibility (HY) -8000 + (ID) 2350
Total energy: -196006.0 ( -92.28 by residue)
QMean score : 0.413
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