Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNLENLDWKNLGFSYIKTDFRFIATYKNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEEL--FLKACAEVIKANQKWLAPYKSGASLYLRPFVIGVGD-NLGVKPASEYLFIVFCA--PVGAYFKGGIEKGGARFITTAFDRAAPKGT-GGVKVGGNYAASLLAHKIATEQGYDDCIYLDPTTHTKIEEVGAANFFGITHDDAFITPHSPSILPSVTRKSLMVLAKEHLKLKVEEREILIDELGAFKEAGACGTAAIITPIKEIAHNNKSYSFEAPGNITKQLYDLLLSIQQGEQEAPKDWIFEVG |
| 1I1K Chain:A ((10-307)) | -------------------------------WFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGP-VVFRHREHMQRLHDSAKIYRFP-VSQSIDELMEACRDVIRKNNL--------TSAYIRPLIF-VGDVGMGVNPPAGYSTDVIIAAFPW-------ALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVNGY--ISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKE-LGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSV--DGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140484 for 2294 contacts (-61.2/contact) +
2D Compatibility (PS) -30510 + (NN) -15525 + (LL) 2104
1D Compatibility (HY) -16800 + (ID) 4900
Total energy: -206115.0 ( -89.85 by residue)
QMean score : 0.405
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