Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVIKDAHFLTSSNNLSQCPASLTSEMVILGRSNVGKSTFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLIDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTIHFNALSSKYPTLEIVRQTLLKYLLTNPL
2WJI Chain:A ((2-162))
----------------------KSYEIALIGNPNVGKSTIFNALTGENV-YIG-----TVEKKEGEFEY------NGEKFKVVDLPGVYSLTA-NSIDE---IIARDYII-NEKPDLVVNIVDATAL--ERNLYLT---LQLMEMGANLLLALNKMDLAKSLGIEIDVDKLEKIL--GVKVVPLSAAKKMGI----EELKKAISIAVK
General information:
TITO was launched using:
RESULT:
Template:
2WJI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82515 for 1210 contacts (-68.2/contact) +
2D Compatibility (PS) -17048 + (NN) -6453 + (LL) 3616
1D Compatibility (HY) -4800 + (ID) 1650
Total energy: -108850.0 ( -89.96 by residue)
QMean score : 0.356
(partial model without unconserved sides chains):
PDB file :
Tito_2WJI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WJI-query.scw
PDB file :
Tito_Scwrl_2WJI.pdb
: