Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAKEIGELFAQGKG-TMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIA--------------------ANREKNRRVEIMVRPINRDTLDEDE |
| 1R1M Chain:A ((7-143)) | -----------------------------------------------------------------------------------------------------------------------------------------------VDETISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNIQS--VRVEGHTDFMG----SDKYNQALSERRAYVVANNLV--SNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPDRRVDVKIRSIV-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20582 for 867 contacts (-23.7/contact) +
2D Compatibility (PS) -12576 + (NN) -7310 + (LL) 12156
1D Compatibility (HY) -3200 + (ID) 1450
Total energy: -32962.0 ( -38.02 by residue)
QMean score : 0.462
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