Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKLTNVVKKFGKIEAVKGINLEVEKGSLFAFLGENGAGKSTTLSMICTESEPTSGEIYIDDEKLTFKNRKL--FRQKLGVVFQENVLDDLLTVRENLY---NRASLYGKTKAEITERLALVSSIMGIEDILNRRFEKLSGGQKRRAEIARAIMHDPEILLLDEPTTGLDPKTRVSVWKIIDYLREELGMTVFLTTHYLEEAKD-ADQLAVIHKGKIIAQGTPTNIRSRFSVDKIFFYDAKVAELQKIMKKANLPFKVSKATMRVDVITQDVEILAILNQAAGLYGSFEVIKGNLDDAFISMIKEESDD
3C41 Chain:J ((3-241))MIDVHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAE-AKAMELLDKV-GLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANE-GMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKV-------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3C41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125392 for 1885 contacts (-66.5/contact) +
2D Compatibility (PS) -24884 + (NN) -4224 + (LL) 6220
1D Compatibility (HY) -17600 + (ID) 3950
Total energy: -169830.0 ( -90.10 by residue)
QMean score : 0.454

(partial model without unconserved sides chains):
PDB file : Tito_3C41.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C41-query.scw
PDB file : Tito_Scwrl_3C41.pdb: