Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAAKNV--GTVMSTHVIPRPHTDVEEILPVRVKSDE
3SSQ Chain:C ((22-112))
-PIAVGMIETRGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAGVDSAKRVNGGEVLSTHIIARPHENLEYVLPIR-----
General information:
TITO was launched using:
RESULT:
Template:
3SSQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31797 for 681 contacts (-46.7/contact) +
2D Compatibility (PS) -10053 + (NN) -3785 + (LL) 464
1D Compatibility (HY) -9600 + (ID) 2650
Total energy: -57421.0 ( -84.32 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_3SSQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SSQ-query.scw
PDB file :
Tito_Scwrl_3SSQ.pdb
: