Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKIVLVDDEPLILKGLESIIPEFEQSIEIIGTAKNGAVALDLFANQEVDVLLTDIEMPVMNGLELIDEWKKRQPATKTIVLSGFEDFHYVKRGLSAGIENYLLKPLNEQELKETLIQIEKKQMTDSVIPREEAYYILRDNTIWRWLNLRINKEEWEERLALYDMALNPKENAVLIQIQATKEIDLAEWKNLSEQYRKDFSFMLLTPENEIIVGITEQTSISEQILAIHQDMKKRISNEAFYLFISEKVQGEMMYPQAFRQLTRLLPERLVQEPGSLIAYQKRTKHTWRPKRKQHQLAKLLVMNNEKEIKAWINNFFKEWNDHKLESDPHQMLHILNELLVMMAESDPKELSESMGRIAEETSIEGLEEATLAYAIRYYNRKKQTDESKSPIIQNVLSYITEHFAEGMSLKTLGNDFHINAVYLGQLFQKEMGEHFTDYLNRYRVNYAKEELLQTKDNLTIIAGKSGYTDMAYFYRQFKKHTGETPNRYRKIHQ |
1NY5 Chain:A ((1-384)) | -MNVLVIEDDKVFRGLLEEYLSMKGIKVESA---ERGKEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKEEEY----------------------------------------------VFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLD-------EIGEL-----SLEAQAKLLRVIESGKFYRLGGRKEIEVNV---RILAATNRNIKELVK-----------EGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEV-----------------EGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96371 for 3005 contacts (-32.1/contact) +
2D Compatibility (PS) -40458 + (NN) -7778 + (LL) 8848
1D Compatibility (HY) -13600 + (ID) 2900
Total energy: -152259.0 ( -50.67 by residue)
QMean score : 0.318
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