Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLVLIRHGQSEWNKLNLFTGWHDVDLSQEGVVEAMTAGKRIKEAGLEFDVAFTSVLTRAIKTLNYVLEESDQMWVPVHKSWRLNERHYGALQGLNKQETAEKYGADQVQKWRRSYDTLPPLLEENDERQAKNDRRYQLLDTHAIPSGENLKVTLERVIPYWMDTIAPEIKEGRRVVIAAHGNSLRALVKFLEGISDDEIMDLEIPTGVPLVYELNADLKPV--NKYYLDK
1RII Chain:D ((6-232))-SLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRAITTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPPPIERGSQFSQDADPRYA--DIGGGPLTECLADVVARFLPYFTDVIVGDLRVGKTVLIVAHGNSLRALVKHLDQMSDDEIVGLNIPTGIPLRYDLDSAMRPLVRGGTYLD-


General information:
TITO was launched using:
RESULT:

Template: 1RII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67006 for 1910 contacts (-35.1/contact) +
2D Compatibility (PS) -24246 + (NN) -8288 + (LL) 624
1D Compatibility (HY) -20400 + (ID) 5800
Total energy: -125116.0 ( -65.51 by residue)
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_1RII.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RII-query.scw
PDB file : Tito_Scwrl_1RII.pdb: