Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKLILGLVMMMALFSLAACGGGGDVVKTDSGDVTKDELYDAMKDKYGSEFVQQLTFEKILGDKYKVSDEDVDKKFNEYKSQYGDQFSAVLTQSGLTEKSFKSQLKYNLLVQKATEANTDTSDKTLKKYYETWQ------------PDITVSHILVADEN----------------------KAKEVEQKLKDG-EKFADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFEKAAYALKNKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKDANVKVEDKDLKDAFKDFDGSSSSDSDSSK |
| 1YW5 Chain:A ((11-177)) | --------------------------------------------------------------------------------------NWTIRVSRSH-NKEYFLNQSTNESSWDPP-----YGTDKEVLNAYIAKFKNNGYKPLVNEDGQVRVSHLLIKNNQSRKPKSWKSPDGISRTRDESIQILKKHLERILSGEVKLSELANTESDCS-SHDRGGDLGFFSKGQMQPPFEEAAFNLH-VGEVSNIIETNSGVHILQRTG------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YW5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6605 for 911 contacts (-7.3/contact) +
2D Compatibility (PS) -14607 + (NN) -9241 + (LL) 8944
1D Compatibility (HY) -5600 + (ID) 1800
Total energy: -28909.0 ( -31.73 by residue)
QMean score : 0.490
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