Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKKVVTDLDLKDKKVLVRVDFNVPMKDGKITNDNRIVAALPTIEYILEQNGKAILFSHLGKVKTEEDKEGKSLRPVAVRLSELLGKEVKFVPTTRGPELEKAIDELKDGEVLLFENTRFEDIDG---KKESKNDPELGKYWASLGDVFVNDAFGTAHRAHASNVGIASNLESAAGFLMEKEIKFIGGVVDNPARPLVAILGGAKVSDKIGVIENLLTK--ADKVLVGGGMTFTFMAAQGQEIGKSLLEA-------DKVELAKGLLEKAGDK-LVLPVDAVVSKEFSNDAPFH-TVSADSIPADEMGLDIGQATIDLFTKELQGAKTVVWNGPMGVFELSNFAKGTIGVCEAIANLTDATTIIGGGDSAAAAMDLGFADKFTHISTGGGASLEYLEGKELPGVASISDK |
| 2CUN Chain:A ((1-401)) | --MFRLEDFNFHNKTVFLRVDLNSPMKDGKIISDARFKAVLPTIRYLIESGAKVVIGTHQGKPYSE---DYTTTEEHARVLSELLDQHVEYIEDIFGRYAREKIKELKSGEVAILENLRFSAEEVKNKPIEECEKTFLVKKLSKVIDYVVNDAFATAHRSQPSLVGFARIKPMIMGFLMEKEIEALMRAYYSKDSPKIYVLGGAKVEDSLKVVENVLRRERADLVLTGGLVANVFTLAKGFDLGRKNVEFMKKKGLLDYVKHAEEILDEF-YPYIRTPVDFAVDYKGERV-EIDLLSENRGLLHQYQIMDIGKRTAEKYREILMKARIIVANGPMGVFEREEFAIGTVEVFKAIADS-PAFSVLGGGHSIASIQKYGI-TGITHISTGGGAMLSFFAGEELPVLRALQIS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CUN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -185399 for 3549 contacts (-52.2/contact) +
2D Compatibility (PS) -41336 + (NN) -9033 + (LL) 612
1D Compatibility (HY) -24000 + (ID) 7350
Total energy: -266506.0 ( -75.09 by residue)
QMean score : 0.550
|
|
|