Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQS-EANKGKIGLFAGIDGCRFKRQVVPGDQLLLEAEITRMRGAIAKAKVKAT--VEGDLVCE-AEIMFALSDLPK
3AZ9 Chain:Q ((11-152))
-IDIEDIKKILPHRYPFLLVDKVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVLQIEALAQLAGILCLKSDDSQKNNLFLFAGVDGVRWKKPVLPGDTLTMQANLISFK---GIAKLSGVGYVNGKVVINISEMTFAL-----
General information:
TITO was launched using:
RESULT:
Template:
3AZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98151 for 973 contacts (-100.9/contact) +
2D Compatibility (PS) -14199 + (NN) 314 + (LL) 380
1D Compatibility (HY) -17600 + (ID) 3350
Total energy: -132606.0 ( -136.29 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_3AZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AZ9-query.scw
PDB file :
Tito_Scwrl_3AZ9.pdb
: