Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNKRVAFILGGSGGIGKAVVQKLVEQNFAVAVHYAGNKAKAETLVENIVKSGGEAISVGGDVADEAQMIRAFDFIESQFGGIDVVINTAGIMKLSPIATLDMDDFDLIQRTNVRGTFVVSKQA--ALRVRNGGAIINFSTSVTRTSFPTYGAYVASKAGVESLTLILARELRGKDITVNAVAPGPTATPLFLTGKDDKTIDNLAKATPLERLGQPEDIAETVAFLAGPARWVNGQVIFT-NGGLA
3VZS Chain:B ((12-254))-STQRIAYVTGGMGGIGTAICQRLAKDGFRVVAGCGPNSPRREKWLEQQKALGFDFIASEGNVADWDSTKTAFDKVKSEVGEVDVLINNAGITRDVVFRKMTRADWDAVIDTNLTSLFNVTKQVIDGMADRGWGRIVNISSVNGQKGQFGQTNYSTAKAGLHGFTMALAQEVATKGVTVNTVSPGYIATDMVKAIRQD-VLDKIVATIPVKRLGLPEEIASICAWLSSEESGFSTGADFSLNGGL-


General information:
TITO was launched using:
RESULT:

Template: 3VZS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122297 for 2022 contacts (-60.5/contact) +
2D Compatibility (PS) -25993 + (NN) -11640 + (LL) 416
1D Compatibility (HY) -12400 + (ID) 4050
Total energy: -175964.0 ( -87.02 by residue)
QMean score : 0.483

(partial model without unconserved sides chains):
PDB file : Tito_3VZS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VZS-query.scw
PDB file : Tito_Scwrl_3VZS.pdb: