Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRDEVFEKMLELLRQQLGDPQLDITPESSLHDDLAIDSIALTEFIINLEDVFHLEIPDEAVEHMSSVQQLLDYIIEHK
2QNW Chain:A ((7-80))
----PLLERVKDVVADQLGVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEKAK
General information:
TITO was launched using:
RESULT:
Template:
2QNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64523 for 503 contacts (-128.3/contact) +
2D Compatibility (PS) -8048 + (NN) -6284 + (LL) 204
1D Compatibility (HY) -5600 + (ID) 1200
Total energy: -85451.0 ( -169.88 by residue)
QMean score : 0.807
(partial model without unconserved sides chains):
PDB file :
Tito_2QNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QNW-query.scw
PDB file :
Tito_Scwrl_2QNW.pdb
: