Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIRLSKFIKMIVVILFLISVAASFYFFHVAQVRDDKSFISNGQRKPGNSLYAYDKSFDKLLKQKIEMTNQNIKQVAWYVPAAKKTHKTAVVVHGFANSK--ENMKAYGWLFHKLGYNVLMPDNIAHGESHGQLIGYGWND-RENIIKWTEMIVDKNPSSQITLFGVSMGGATVMMASGEKLPSQVVNIIEDCGYSSVWDELKF--QAKEMYGLPAFPLLYEVSTISKIRAGFSYG--QASSVEQLKKNNLPALFIHGDKDNFVPTSMVYDNYKATAGKKELYIVKGAKHAKSFETEPEKYEKRISSFLKKYEK-
2WTM Chain:A ((2-251))------------------------------------GAMYIDCD---------------GIKLNAYLDMPKNN-----------PEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAME-RDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQ-YKNCKLVTIPGDTH--CYDHHLELVTEAVKEFMLEQIAK


General information:
TITO was launched using:
RESULT:

Template: 2WTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44021 for 2096 contacts (-21.0/contact) +
2D Compatibility (PS) -25889 + (NN) -8215 + (LL) 6776
1D Compatibility (HY) -6800 + (ID) 2150
Total energy: -80299.0 ( -38.31 by residue)
QMean score : 0.406

(partial model without unconserved sides chains):
PDB file : Tito_2WTM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WTM-query.scw
PDB file : Tito_Scwrl_2WTM.pdb: