Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKTGILNSHLAKLADDLGHTDRVCIGDLGLPVPNGIPKIDLSLTSGIPSFQEVLDIYLENILVEKVILAEEIKEANPDQLSRLLAKLD-------NSVSIEYVSHDHLKQMTQDVKAVIRTGENTPYSNIILQSGVII
3E7N Chain:A ((4-141))
MKKGTVLNSEISSVISRLGHTDTLVVCDAGLPIPNSTARIDMALTQGVPSFMQVVDVVTREMQVEAAILATEIKQQNPQLHETLLTHLEQLQQHQGNTIKISYTTHEQFKKLTADSQAVIRSGECSPYANVILCAGVT-
General information:
TITO was launched using:
RESULT:
Template:
3E7N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80452 for 995 contacts (-80.9/contact) +
2D Compatibility (PS) -14522 + (NN) -9356 + (LL) 204
1D Compatibility (HY) -12400 + (ID) 3000
Total energy: -119526.0 ( -120.13 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_3E7N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E7N-query.scw
PDB file :
Tito_Scwrl_3E7N.pdb
: