Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNCIFCKIISGEIPSSKVYEDDEVLAFLDITQTTTGHTLLIPKKHVRNVLEMDEKTAQITFERLPKVARAVQAATKAKGMNIINNNEEIAGQTVFHAHVHLVPRFDESDGIKIHYTTHEPDFEALAKLAKEIRKEIQL
3KSV Chain:A ((11-148))
-ANCIFCKIIKGDIPCAKVAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVGVLLAKASRAVAGPDGSMQYNVLQNNGSLAHQEVPHVHFHIIPKTDEKTGLKIGWDTVKVASDELAEDAKRYSEAIAK
General information:
TITO was launched using:
RESULT:
Template:
3KSV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49443 for 874 contacts (-56.6/contact) +
2D Compatibility (PS) -14700 + (NN) -4650 + (LL) 208
1D Compatibility (HY) -8400 + (ID) 2700
Total energy: -79685.0 ( -91.17 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_3KSV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KSV-query.scw
PDB file :
Tito_Scwrl_3KSV.pdb
: