Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYAQLIKHYGQLLEACGEEVENFIYVLKDLKQWSTTDYLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDERVLIPRPETEELVDLILSENKV-EDCSVLDIGTGSGAIAISLKKER-PSWDVLASDISVSALDLAKENANNCD-AEVTFIESDVFSNIS--GKFDIIVSNPPYISYNDKDEVGKNVLASEPHSALFADEEGLAIYRKIIENSREYLQPRGKLYFEIGYKQGDDLRSLLKRYFPNNRCRVLKDIFGKDRMVVLDNE |
| 3TMA Chain:A ((186-320)) | --------------------------------------------------------------------------------------------SLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHGL-------------K---------EGLFHLYWDFLRGALALLPPGGRVALLTLRPALLKRALPPGFALRHARVVEQGGVYPRVFVLEKL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TMA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30282 for 947 contacts (-32.0/contact) +
2D Compatibility (PS) -14230 + (NN) -10442 + (LL) 8376
1D Compatibility (HY) -4400 + (ID) 1650
Total energy: -52628.0 ( -55.57 by residue)
QMean score : 0.524
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