Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIIIQRVNQASVSIEDDVVGSIEKGLVLLVGIAPEDTTEDIAYAVRKITSMRIFSDDEGKMNLSIQDIKGSVLSISQFTLFADTKKGNRPAFTGAADPVKANQFYDIFNQELAN-HVSVETGQFGADMQVSLINDGPVTIVLDTKNK
2DBO Chain:A ((1-147))
MRAVIQRVKKSWVEVDGKVVGSINEGLNVFLGVRKGDTEEDIEKLVNKILNLRIFEDERGKFQYSVLDIKGEILVVSQFTLYANVKKGRRPSFEEAEEPKRAKELYEKFVDKIKESGLKVETGIFGAMMDVFIENWGPVTIIIDSREI
General information:
TITO was launched using:
RESULT:
Template:
2DBO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91605 for 1111 contacts (-82.5/contact) +
2D Compatibility (PS) -15718 + (NN) -5884 + (LL) 0
1D Compatibility (HY) -15600 + (ID) 3350
Total energy: -132157.0 ( -118.95 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_2DBO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DBO-query.scw
PDB file :
Tito_Scwrl_2DBO.pdb
: