Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTPLYKALIQHARRNSHSFHVPGHHNGDVFFDDAKSIFDPLLTIDVTELAGLDDLHHPSGVIKEAQELASQLYGSA--ESFFLVNGTTVGNLAMILSVCEPGDTILVQRNCHKS--VFHAVDLSGAEPVYLAPDVDSAMHVPTHVPLGTIKEALEAYPDAKGLVLTNPT-YYGHSADLTEIITEAHHYGIPVLVDEAHGAHFILGEPFPVSALKMGADIVVQSAHKTLPAMTMGSYLHLNSSCRINRDRVAEYL----------------------NRLQSSSPSYPIMASLDIARAYVQHIIE-EQKLSDILQRIETLKQTFDSLTNAEAVNPANPLIITDPLKLTIRSKRGHSGYTLQSILE-RANIFTELA----DENQVLLVL-PLGGKRRINAEIIRSIDEEIEKTPPDQTFVSAEWGVQPVTVLPYPKKVLHSFKKEYVSFEEAAGRLNAEDIIPYPPGIPMIMAGERITKESVQKLSRLISMKTHVQGNMKIKEKQLLVYIEEEKS |
| 2CH1 Chain:A ((50-383)) | -----------------------------------------------------------FRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPD------RPFSLETLARAIEL-HQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFY-----MDKWEIDAVYTGAQ-VLGAPPGITPISISPK-AL--DVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEE-GLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRH--RLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKAT------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -149071 for 2467 contacts (-60.4/contact) +
2D Compatibility (PS) -32379 + (NN) -8841 + (LL) 11720
1D Compatibility (HY) -6400 + (ID) 2100
Total energy: -187071.0 ( -75.83 by residue)
QMean score : 0.508
|
|
|