Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQHTIDQTQVIHTKPSALSYKEKTLVMGILNVTPDSFSDGGKYDSLDKALLHAKEMIDDGAHIIDIGGESTRPGAECVSEDEEMSRVIPVIERITKELGVPISVDTYKASVADEAVKAGASIINDIWGAKHDPKMASVAAEHNVPIVLMH--NRPERNYNDLLPDMLSDLMESVKIAVEAGVDEKNIILDPGIGFAKTYHDNLAVMNKLEIFSGLGYPVLLATSRKRFIGRVLDLP-PEERAEGTGATVCLGIQKGCDIVRVHDVKQIARMAKMMDAMLNKGGVHHG
2DZB Chain:B ((27-273))
----------------------DRVRLLGVLNLTPD----------PERALERAREMVAEGADILDLGAEST-------PVEEEKRRLLPVLEAVLS-LGVPVSVDTRKPEVAEEALKLGAHLLNDVTGLR-DERMVALAARHGVAAVVMHMP--AHARYRDVVAEVKAFLEAQARRALSAGVPQ--VVLDPGFGFGKLLEHNLALLRRLDEIVALGHPVLVGLSRKRTIGELSGVEDPAQRVHGSVAAHLFAVMKGVRLLRVHDVR---------------------
General information:
TITO was launched using:
RESULT:
Template:
2DZB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154321 for 1814 contacts (-85.1/contact) +
2D Compatibility (PS) -24360 + (NN) -16057 + (LL) 3568
1D Compatibility (HY) -19200 + (ID) 4650
Total energy: -215020.0 ( -118.53 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_2DZB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DZB-query.scw
PDB file :
Tito_Scwrl_2DZB.pdb
: