Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIAYIALGSNIGDRETYLRQAVALLHQHAAVTVTKVSSIYETDPVGYEDQAQFLNMAVEIKTSLNPFELLELTQQIENELGRTREVRWGPRTADLDILLFNRENIETEQLIVPHPRMYERLFVLAPLAEICQQVEKEATSAETDQEGVRVWKQKSGVDEFVHSES
4CWB Chain:A ((3-144))
HMIQAYLGLGSNIGDRESQLNDAIKILNEYDGISVSNISPIYETAPVGYTEQPNFLNLCVEIQTTLTVLQLLECCLKTEECLHRIRKERWGPRTLDVDILLYGEEMIDLPKLSVPHPRMNERAFVLIPLNDIAANVVEPRSK-------------------------
General information:
TITO was launched using:
RESULT:
Template:
4CWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89952 for 1093 contacts (-82.3/contact) +
2D Compatibility (PS) -14747 + (NN) -3120 + (LL) 1600
1D Compatibility (HY) -13200 + (ID) 3450
Total energy: -122869.0 ( -112.41 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_4CWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CWB-query.scw
PDB file :
Tito_Scwrl_4CWB.pdb
: