Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDDFKLDKPTPYYLQFYNQLKKMIFNGTFKPGERINETQLAKSFGVSRSPIREAMRLLEKDGLLKADDRNGFSITSLTAKDVDEIYKIRIPLEQLAVELVIDEADEEELTILEKQLEETEKAIHNGTEDTEIIRLNQKFHELLVDFSHNRHLKNLLEHVNDLIHFCRILNYT--GDHRAETILREHRRIFEEVKKKNKEAAKQHVLAHFNHDCEHLKHVLEEGKEN
4P9F Chain:A ((9-220))--------MVSLTLQVENDLKHQLSIGALKPGARLITKNLAEQLGMSITPVREALLRLVSVNALSVAPAQAFTVPEVGKRQLDEINRIRYELELMAVALAVENLTPQDLAELQELLEKLQQAQEK-GDMEQIINVNRLFRLAIYHRSNMPILCEMIEQLWVRMGPGLHYLYEAINPAELREHIENYHLLLAALKAKDKEGCRHCLAEIMQQNIAILYQQYN-----


General information:
TITO was launched using:
RESULT:

Template: 4P9F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 839 13111 15.63 62.73
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : 15.63
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.269

(partial model without unconserved sides chains):
PDB file : Tito_4P9F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P9F-query.scw
PDB file : Tito_Scwrl_4P9F.pdb: