Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSHSVVCIGELLIDFFCTDVD-----VDLMEGRQFLKSAGGAPANVSAAIAKLGGDAAFSGKVGKDPFGYFLKRTLDAVHVDTSMLVMDEKAPTTLAFVSLKQNGERDFVFNRGADALFTLEDIDQ--EKLNEAKILHFGSATALLSDPFCSAYLRLMSIAKDNGQFISFDPNYREDLWRGRVSEFVSVAKKAIAVSDFVKVSDEELEIISGVKD-----HEKGVAILHEIGANIVAVTLGKSGTLLSNGKD--REIIPSIPVTSIDSTGAGDAFVGAALYQLAN--TDQIQSVDADFVKLREIVAFANKVGALVCTKIGAIDALPSLDEIGVSL
2FV7 Chain:A ((24-330))--VAAVVVVGSCMTDLVSLTSRLPKTGETI-HGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEIT------PATSLEALTMARRSGVKTLFNPAPAIA----------DLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNL----------SLEDMLNRSNFIAAVSVQAAGTQSSYPYKKDLPLTL


General information:
TITO was launched using:
RESULT:

Template: 2FV7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1832 -193012 -105.36 -663.27
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -105.36
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.467

(partial model without unconserved sides chains):
PDB file : Tito_2FV7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FV7-query.scw
PDB file : Tito_Scwrl_2FV7.pdb: