Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETFKSILHEAQRIVVLTGAGMSTESGIPDFRSAGGIWTE----DASRMEAM-SLDYFLSYPRLFWPKFKELFQMKMSGSFEPNEGHLLLAELEKQGKQVDIFTQNIDGLHKKAG--SRHVYELHGSIQTAACPACGARYD----LPHLLEREVPECTAAGNNGDICGTVLKTDVVLFGDAV-MHFDTLYEKLDQADLLLVIGTSLEVAPARFVPEDASLIPGMKKVIINLEPTYCDSLFDMVIHQKIGEFARSLGMKK
4V1C Chain:E ((18-206))-----------QRVVVMVGAGISTPSGIPD--------SNLQQYDLPYPEAIFELPFFFHN-KPFFTLAKELY----PGNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCP-------VCTGVVKPDIVFFGEPLPQRFLLHVVDFPMADLLLILGTSLEVEP-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4V1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 744 -75516 -101.50 -452.19
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain E : 0.72

3D Compatibility (PKB) : -101.50
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_4V1C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4V1C-query.scw
PDB file : Tito_Scwrl_4V1C.pdb: