Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAQSHSSSINYFGSANKVVYEGKDSTNPLAFKYYNPQEVIGGKTLKEHLRFSIAYWHTFTADGTDVFGAATMQRPWDHYKGMDLAKMRVEAAFEMFEKLDAPFFAFHDRDIAPEGSTLKETNQNLDMIMGMIKDYMRNSGVKLLWNTANMFTNPRFVHGAATSCNADVFAYAAAQVKKGLETAKELGAENYVFWGGREGYETLLNTDLKFELDNLARFMHMAVDYAKEIGYTGQFLIEPKPKEPTTHQYDTDAATTIAFLKQYGLDNHFKLNLEANHATLAGHTFEHELRMARVHGLLGSVDANQGHPLLGWDTD-EFPTDLYSTTLAMYEILQNGGLGSGGLNFDAKVRRSSFEPDDLIYAHIAGMDAFARGLKVAHKLIEDRVFEDVIQHRYRSFTEGIGLEIIEGRANFHTLEQYALNHKSIKNESGRQEKLKAILNQYILEV
1MNZ Chain:A ((10-306))-------------------------------------------------RFTFGLW-TVGWQGRDPFGDATRR-----------ALDPVESVRRLAE-LGAHGVTFHDDDLIPFGSSDSEREEHVKRFRQALDD----TGMKVPMATTNLFTHPVFKDGGFTANDRDVRRYALRKTIRNIDLAVELGAETYVAWGGREGAESGGAKDVRDALDRMKEAFDLLGEYVTSQGYDIRFAIEPKPNEPRGDILLPTVGHALAFIERLERPELYGVNPEVGHEQMAGLNFPHGIAQALWAGKLFHIDLN-GQNGIKYDQDLRFGAGDLRAAFWLVDLLESAGY-SGPRHFDFKPPRT--EDFDGVWASAAGC-------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1MNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1538 -101136 -65.76 -341.68
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -65.76
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.498

(partial model without unconserved sides chains):
PDB file : Tito_1MNZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MNZ-query.scw
PDB file : Tito_Scwrl_1MNZ.pdb: