Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKFKKNFLVGLSAALMSISLFSATASAASTDYWQNWTDGGGIVNAVNGSGGNYSVNWSNTGNFVVGKGWTTGSPFRTINYNAGVWAPNGNGYLTLYGWTRSPLIEYYVVDSWGTYRPT--GTYKGTVKSDGGTYDIYTTTRYNAPSIDGDRTTFTQYWSVRQSKRPTGSNATITFSNHVNAWKSHGMNLGSNWAYQVMATEGYQSSGSSNVTVW
1REE Chain:B ((14-189))--------------------------------FYSYWNDGHGGVTYTNGPGGQFSVNWSNSGNFVGGKGWQPGTKNKVINF-SGSYNPNGNSYLSVYGWSRNPLIEYYIVENFGTYNPSTGATKLGEVTSDGSVYDIYRTQRVNQPSIIGT-ATFYQYWSVRRNHRSSGS---VNTANHFNAWAQQGLTLGT-MDYQIVAVEGYFSSGSASITV-


General information:
TITO was launched using:
RESULT:

Template: 1REE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1010 -11567 -11.45 -66.48
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -11.45
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.542

(partial model without unconserved sides chains):
PDB file : Tito_1REE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1REE-query.scw
PDB file : Tito_Scwrl_1REE.pdb: