Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYEFKDYYQNTVQLSFDDQPFSDSPKHVWVICRFGGKWLLTEHEDRGYEFPGGKVEPMECAEEAALREVKEETGARVKSLKYLGQYKVLGKEKVIVKNIYFADIEKLEKQADYFETKGPVLFHELPENLSRNKKFSFIMKDSVLPISLKKLKESGWIE
3GRN Chain:B ((38-90))-----------------------------------------------WDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAGQVNFELTEKKVIAIVF----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GRN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 132 -8734 -66.17 -164.79
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : -66.17
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_3GRN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GRN-query.scw
PDB file : Tito_Scwrl_3GRN.pdb: