Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREDTKVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTN-EETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLH-YFVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAHE-HSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIE-KNSIVVKSTMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDPKARVQPLHSTSLFENK
3F8D Chain:A ((10-319))-VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETP--GGQLTEAGIV---DDYLGLIEIQASDMIKVFNKHIEKYEVPVLLD-IVEKIENR---EFVVKTKRKGEFKADSVILGIGVK---RRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK---------------


General information:
TITO was launched using:
RESULT:

Template: 3F8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1856 -61616 -33.20 -202.68
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -33.20
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_3F8D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F8D-query.scw
PDB file : Tito_Scwrl_3F8D.pdb: