Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMQLQVMNSPFNQEQAELLNRLLPTLTESQKIWLSGYLSAQSVSAQEAAGTPAAAVSAEAPAPAVSKEVTVLYGSQTGNAQGLAENAGKQLEQSGFQVTVSSMSDFKPNQLKKVTNLLIVVSTHGEGEPPDNALSFHEFLHGRRAPKLEDLRFSVLALGDSSYEFFCQTGKEFDQRLEELGGKRISPRVDCDLDYDEPAAEWLEGVLKGLNEAGGGSAAPAPAAASQTGESSYSRTNPFRAEVLENLNLNGRGSNKETRHVELSLEGSGLTYEPGDSLGVYPENDPELVELLLKEMNWDPEEIVTLNKQGDVRPLKEALISHYEITVLTKPLLEQAAQLTGNDELRELLAPGNEENVKAYIEGRDLLDLVRDYGPFSVSAQEFVSILRKMPARLYSIASSL---SANPDEVHLTIGAVRY-DAHGRERKGVCS-ILCAERLQPGDTLPVYVQHNQNFKLPKDPETPIIMVGPGTGVAPFRSFM-----QEREETGAEGKAWMFFGDQHFVTDFLYQTEWQNWLKDGVLT-KMDVAFSRDTE----EKVYVQHRMLEHSAELFEWL-QEGAAVYICGDEKHMAHDVHNTLLEIIEKEGNMSREEAEAYLADMQQQKRYQRDVY
1SM4 Chain:B ((75-275))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLYSIASSALGDFGDSKTVSLCVKRLVYTNDKGEEVKGVCSNFLC--DLKPGADVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPT-SSSLLYKEEFEKMKEKAPENFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWTLLKKDNTFVYMCG-LKGMEQGIDDIMSSLAAKEG-------------------------


General information:
TITO was launched using:
RESULT:

Template: 1SM4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 757 17959 23.72 97.08
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.63

3D Compatibility (PKB) : 23.72
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.503

(partial model without unconserved sides chains):
PDB file : Tito_1SM4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SM4-query.scw
PDB file : Tito_Scwrl_1SM4.pdb: