Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEEKIYDVIIIGAGPAGMTAAVYTSRANLSTLMIERGIPGGQMANTEDVENYPGFESILGPELSNKMFEHAKKFGAEYAYGDIKEV-IDGKEYKVVKAGSKEYKARAVIIAAGAEYKKIGVPGEKELGGRGVSYCAVCDGAFFKGKELVVVGGGDSAVEEGVYLTRFASKVTIVHRRDKLRAQSILQARAFDNEKVDFLWNKTVKEIHEENGKVGNVTLVDTVTGEESEFKTDGVFIYIGMLPLSKPFEN-LGITNEEGYIETNDRMETKVEGIFAAGDIREKS--LRQIVTATGDGSIAAQSVQHYVEELQETLKTLK
3F8D Chain:A ((11-319))-KPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET-PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENR--EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDK-VVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK--------


General information:
TITO was launched using:
RESULT:

Template: 3F8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1844 -56310 -30.54 -185.84
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -30.54
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_3F8D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F8D-query.scw
PDB file : Tito_Scwrl_3F8D.pdb: