Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVFSALLLAGVLSALALAVGGAVGMRLTSRVVEQRQRVATEWSGITVSQMLQCIVTLMPLGAAVVDTHRDVVYLNERAKELGLVRDRQLDDQAWRAARQALGGEDVEFDLSPRKRSATGRSGLSVHGHARLLSEEDRRFAVVFVHDQSDYARMEAARRDFVANVSHELKTPVGAMALLAEALLASADDSETVRRFAEKVLIEANRLGDMVAELIELSRLQGAERLPNMTDVDVDTIVSEAISRHKVAADNADIEVRTDAP-SNLRVLGDQTLLVTALANLVSNAIAYSPRGSLVSISRRR--RGANIEIAVTDRGIGIAPEDQERVFERFFRGDKARSRATGGSGLGLAIVKHVAANHDGTIRVWSKPGTGSTFTLALPALIEAYHDDERPEQAREPELRSNRSQREEELSR |
3SL2 Chain:A ((3-153)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IQIVRFMSLIIDRFEMT-KEQ--EFIRNLPDRDLYVEIDQDKITQVLDNIISNALKYSPEGGHVTFSIDVNEEEELLYISVKDEGIGIPKKDVEKVFDRFYRVD------LGGTGLGLAIAKEMVQAHGGDIWADSIEGKGTTITFTLPYKE------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -69289 for 1018 contacts (-68.1/contact) +
2D Compatibility (PS) -15193 + (NN) -9562 + (LL) 22240
1D Compatibility (HY) -10000 + (ID) 2700
Total energy: -84504.0 ( -83.01 by residue)
QMean score : 0.565
|
|
|