Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSADLTAHARIREAAIEQFGRHGFG-VGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEEIRSSKAAALKS--NDPTTWLA----QMAEIESYAPLMAYLVRSMQSGGE---LAKMLWQKMIDNAEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVLPSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG
3LWJ Chain:A ((10-199))
----NKERRQKILTCSLDLFIEKGYYNTSIRDIIALSEVGTGTFYNYFVDKEDILKNLLEDFAKQIISSISEYYLVEKDLYERFIETKRLTMEVFAQNETLSEIYSRVAGSSAPIDQCLKQFEDRLLEFYSRNIEYGIKKGVFK-NVPVSPIAHSILAIEKFSLYKWVVLKA-I------TKEEMIEMVLSFHKTLAVGLLV--------------------
General information:
TITO was launched using:
RESULT:
Template:
3LWJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78727 for 1220 contacts (-64.5/contact) +
2D Compatibility (PS) -20103 + (NN) -10924 + (LL) 2540
1D Compatibility (HY) -9200 + (ID) 1450
Total energy: -117864.0 ( -96.61 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_3LWJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LWJ-query.scw
PDB file :
Tito_Scwrl_3LWJ.pdb
: