Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASL--ASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATLAAIAAGGPLP
4YMZ Chain:B ((2-250))-ARKTIIAGNWKMNLSLKEAVFLAHSIREKIPSISKDKVSM-VFPSTLHLENVSKILEGSSV--IVGAQNCYHSGLAAFTGETSPDQLKEIGVKVVMVGHSERRQFLGESNFFCNDKIRFLLKNEFTVLYCVGETLSERESGKTLEVLSSQIREGLKGIDSVFFSNLILAYEPVWAIGTGKVATPSQAQEVHSFIRKEISGLFVGASSISESISILYGGSVKPDNIQDLLKEKDIDGGLVGGASQKISSFAGL----------


General information:
TITO was launched using:
RESULT:

Template: 4YMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138225 for 2094 contacts (-66.0/contact) +
2D Compatibility (PS) -27612 + (NN) -17274 + (LL) 960
1D Compatibility (HY) -22400 + (ID) 5000
Total energy: -209551.0 ( -100.07 by residue)
QMean score : 0.551

(partial model without unconserved sides chains):
PDB file : Tito_4YMZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMZ-query.scw
PDB file : Tito_Scwrl_4YMZ.pdb: