Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFG-PEWVGVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGA-----AAGHALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLV-DLGTRVGVATRFCAFDSGGLADAVAAAEVLVSTIPAEVAAG----YA-GTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVEQFTGLPAPREAMTCALAALD |
2HK9 Chain:A ((9-272)) | -NAQTQLYGVIGFPVKHSLSPVFQNALIRYAGL-NAVYLAFEINPEELKKAFEGFKALKVKGINVTVPFKEEIIPLLDYVEDTAKEIGAVNTVKFENGKAYGYNTDWIGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKEGAK-VFLWNRTKEKAIKLAQKFPL------E--VVNS--PEEVIDKVQVIVNTTSVGLKDEDPEIFNYDLIKKDHVVVDIIYK--ETKLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVPYSVAERSVRD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165380 for 2131 contacts (-77.6/contact) +
2D Compatibility (PS) -26937 + (NN) -6474 + (LL) 644
1D Compatibility (HY) -16000 + (ID) 3250
Total energy: -217397.0 ( -102.02 by residue)
QMean score : 0.412
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