Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANVQYSAVTQRYPGADA--PTVDNLDLDIADGEFLVLVGPSGCGKSTTLRVLAGLEPIESGRISI-----GDVDVTHLPPRARD-VAMVFQNYALYPNMTVAANMG----FALRNAGMSRADTRRRVLEVADMLELTD-LLDRKPAKLSGGQRQRVAMGRAIVRRPRVFCMDEPLSNLDAKLRVSTRSQISGLQRRLGTTTVYVTHDQVEAMTMGDRVAVLKDGVLQQVDTPRALYDDPVNTFVATFIGAPAMNLIDAAVAHGVVRAPDLAIPVPDPAAERVLVGVRPESWDVASIGTPGSLTVHVELVEELGFESFVYATPVDQRGWSSRAPRIVFRTDRRTAVRVGESLAIVPHSQEVRLFNSRTETRLR |
| 1L2T Chain:A ((2-230)) | ---IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGA-MSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHD-INVARFGERIIYLKDGEVEREEKLR------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113688 for 1712 contacts (-66.4/contact) +
2D Compatibility (PS) -23673 + (NN) -5075 + (LL) 10004
1D Compatibility (HY) -15600 + (ID) 3950
Total energy: -151982.0 ( -88.77 by residue)
QMean score : 0.447
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